Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYAEWIAVKVVVSKSIGTVGIRNATLQWGKFYRYTNKDDEISTEEVSSMNVQAGSPQWIASCGRENASSGTQGSFDCYDGNTKMGTFSWDDPWKSGATNTWSFTPASADYAGITSGGNATGTDIGEVTLTLGRFS
3PSR Chain:A ((16-49))
-------------------------------FHKYTRRDDKIDKPSLLTM-MKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDIATDYHKQSHGAAPCS-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3PSR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1594 for 153 contacts (-10.4/contact) +
2D Compatibility (PS) -3627 + (NN) -686 + (LL) 2816
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -6741.0 ( -44.06 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_3PSR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PSR-query.scw
PDB file :
Tito_Scwrl_3PSR.pdb
: