Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTRVLRGLVAALPLFLAACSDSAPSSEEIARLLAERGFDKPACASSTLFKTFPVTLSDSFSGPGPAKGNAAVYDALVGVGLLRRDG-DSYDLTPAGREDYKPESKAFCYSSGFDVSVRSVDPAKPDDYGPAVEKGWLVTVEVKPREVKDWAKNPEVLKQASLTTLQQITQPQVGQVSLVKPRGEEGYKLVNTRFSPRQGFHFNQAW |
1YG2 Chain:A ((38-82)) | -------------------------------------------------------------------QQVYRELNKMGEQGLVTCVLE-VYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVEESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5362 for 169 contacts (-31.7/contact) +
2D Compatibility (PS) -3533 + (NN) -371 + (LL) 4068
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -7148.0 ( -42.30 by residue)
QMean score : 0.379
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