Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGAPKTKGL
2L0D Chain:A ((2-72))
------------------------------IPDLVPVSLT-PVTVVPNTVNTMTATIENQGNKDS--TSFNVSLLVDGIVVDTQTV---TSLESENSTNVDFHWTLDGTANSYTLTVNVDPENAVNEGNESNNTLTALVGTLEHHHHHH-----------------
General information:
TITO was launched using:
RESULT:
Template:
2L0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31480 for 418 contacts (-75.3/contact) +
2D Compatibility (PS) -7503 + (NN) -3541 + (LL) 3016
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -41108.0 ( -98.34 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_2L0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L0D-query.scw
PDB file :
Tito_Scwrl_2L0D.pdb
: