Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLPPCPQCNSEYTYEDGALLVCPECAHEWSPNEAATASDDGKVIKDSVGNVLQDGDTITVIK-DLKVKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRKV
3LJY Chain:A ((109-165))
-----------------------------------------DETVIKANANSLVQLKETVTVGKLDLNVSGSANMV--------VNHLEADK-IECDIDGSGSITIKKGNAKEG
General information:
TITO was launched using:
RESULT:
Template:
3LJY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11546 for 369 contacts (-31.3/contact) +
2D Compatibility (PS) -6231 + (NN) -1429 + (LL) 2056
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -23100.0 ( -62.60 by residue)
QMean score : 0.266
(partial model without unconserved sides chains):
PDB file :
Tito_3LJY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LJY-query.scw
PDB file :
Tito_Scwrl_3LJY.pdb
: