Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRILHFL-GDPAKLGDKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHYPQ---LGVIASYGTQLLDWLET------HTFPAEQRFADAGYAAAQAELFLDELLRHGTTTAL--VFGTVHAVSAEAFFQAAQKRRLRMIAGKVLM-DRNAPPALCDTAASGYAESRALIERWHGNGR---LQYAVTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVGIGSD-VGGGTSLSLLANLADAYKIQQL--RGTSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGERRHVKG |
| 3HPA Chain:A ((29-415)) | --------------------------------KTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGH---LVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLTP---EMIEVSTLTAMAEL-----LQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMS-----------EPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREY-GVSLHTHLAENVNDIAY---------TPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDLRQPLFAGALHDPVAALVFCAPSQTAYTVVNGKVVVREGRLATLDLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228631 for 3032 contacts (-75.4/contact) +
2D Compatibility (PS) -38120 + (NN) -20364 + (LL) 2568
1D Compatibility (HY) -16400 + (ID) 5350
Total energy: -306297.0 ( -101.02 by residue)
QMean score : 0.488
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