Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRTWIRNPLAIFTANGLDAAGGLVVEDGRI--VELLGAGQQPAQPCASQFDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWLKT-LYPVWARLTPEKL-ELATKVALAELLLSGCTTAADHHYLFPGGLEQAIDVQAGVVEELGMRAMLTRGSMSLGEKDGGLPPQQTVQEAETILADSERLIARY--HQRGDGARVQIALAPCSPFSVTPEIMRASAEVAARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAEEIRRLGEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEARQALYLQR-LRYGAERITPELALGWATRGSARLLGRSDI-GELAPGKQADLALFKLDELRFSGSHDPLSALLLCA-ADRADRVMVGGAWRVVDGAVEGLDLAALIARHRAAASALIAG |
| 3LNP Chain:A ((53-463)) | -----------------------LLIKDGIILAIEPQSSCQIPA---TETLDLGQQVLMPGWVNAHGHAAMSLFRGLAD--DLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYFYPQQSGEAALAA--------GIRAVCFAPVLDF--------PTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRPTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTGASIIHCPESNLKLASGFCPIAKLSAANIPLAIGTDGAASNNDLDMFSETKTAALLAKGVSQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPVFDPVSHMVYCTKSTQVSHVWVNGRCLLKNGELTTLNEETLINHAKAWASAIRTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202153 for 3624 contacts (-55.8/contact) +
2D Compatibility (PS) -43607 + (NN) -20717 + (LL) 2108
1D Compatibility (HY) -24000 + (ID) 6650
Total energy: -295019.0 ( -81.41 by residue)
QMean score : 0.513
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