Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSPNGSLKFASQAVAKPYFVFALILFVGQILFGLIMGLQYVVGDFLFPAIPFNVARMVHTNLLIVWLLFGFMGAA-----YYLVPEESDCELYSPKLAWILFW----VFAAAGVLTILGYLLVPYAGLARLTGNELWPTMGREF--LEQPTISKAGIVIVALGFLFNVGMTVLRGRK---------------TAISMVLMTGLIGLALLFLFSFYNPENLTRDKFYWWWVVHLWVEGVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGIIGTG-HHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTIN---RRRRRDYPNRAVALWAMGTTVMAFLGAGVW-GFMHTLAPVNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLRGIGEAMDNRSQVLEMWGFWLMTVAMVFITLFLSAAGVLQVWLQRMPADGAAMTFMATQDQLAIFYWLREGAGVVFLIGLVAYLLSFRRGKAAA |
| 3MK7 Chain:A ((45-421)) | --------------------------------------------NFDLPWTSFGRLRPLHTNAVI----FAFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGF------------------TSSKEYAELEWPIDILITIVWVAYAVVF-FGTLAKRKVKHIYVGNWFFGAFILTVAILHVVNNLEIPVTAMKSYSLYAGAT---DAMVQWWYGHNAVGFFLTAGFLGIMYYFVPK--QAERPVYSYRLSIVHFWALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVV------SLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYHLVPKVFG-REQMHSIGLINTH--FWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343733 for 2647 contacts (-129.9/contact) +
2D Compatibility (PS) -35893 + (NN) -17684 + (LL) 6848
1D Compatibility (HY) -20400 + (ID) 5050
Total energy: -415912.0 ( -157.13 by residue)
QMean score : 0.243
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