Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFFHGVTVTNVDIGARTIALPASSVIGLCDVFTPGAQASAKPNVPVLLTSKKDAAAAFGIGSSIYLACEAIYNRAQAVIVAVGVETAETPEAQASAVIGGISAAGERTGLQALLDGKSRFNAQPRLLVAPGHSAQ-----QAVATAMDGLAEKLR-AIAILDGPNSTD---------EAAVAYA----------KNFGSKRLFMVDPGVQVWDSATNAARNAPASAYAAGLFAWTDAEYGFWSSPSNK--EIKGVTGTSRPVEFLDGDETCRANLLNNANIATIIRD--DGYRLWGNRTLS-SDSKWAFVTRVRTMDLVMDAILAGHKWAVDRGITKTYVKDVTEGLRAFMRDLKNQGAVINFEVYADPDLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA |
| 3J2M Chain:U ((367-646)) | -------------------------------------------------------------------------------------------------------------------------SVDVQLFIAGSCAGESLETASTVQKHVVSIGDVRQDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNV----------RGQILNVIKLAIE--Q------AQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSP----NVRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGNKALGGIYEYRVVCDTTNNTPSVIDRNEFVATFYIQPARSINYITLNFVATA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54939 for 1723 contacts (-31.9/contact) +
2D Compatibility (PS) -25289 + (NN) -16167 + (LL) 10540
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -95805.0 ( -55.60 by residue)
QMean score : 0.289
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