Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGLALKRLSEIPLRLDIVRASTEPGAPLQRVRWW--RQGKVLYRAASPSGDRLPLPPLAERVAV----LDDVS--RFDIRAWVPGKGWTRLPARSKVRASGLEISLARVTRNGVERYRRVVALQ |
| 2HCN Chain:A ((325-395)) | ----------------------------------------------------------------------------------------------------------------DDVEKLTKGKGP--KVRTWLSENGEERLSRMAVSGDDCVVKPLDDRFATSLHFLNAMSKVRKDIQEWKPSTGWYDWQQVPFCSNHFTELIMKDGRTLVTPCRGQDELVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1721 for 248 contacts (6.9/contact) +
2D Compatibility (PS) -6410 + (NN) -1191 + (LL) 9340
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -140.0 ( -0.56 by residue)
QMean score : -0.034
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