Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPAVTPGWPAIPPGATLGGFDGQGRRSWATISRAPSGASCSRNRSATRTYGWGATATTPATITGIPSTTAPAT
2L1Q Chain:A ((4-22))
----------------------------FWRGVSLRPIGASCRDDSECITRLCRKRRCSLSVAQE----------
General information:
TITO was launched using:
RESULT:
Template:
2L1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -197 for 65 contacts (-3.0/contact) +
2D Compatibility (PS) -2025 + (NN) -1031 + (LL) 840
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -3963.0 ( -60.97 by residue)
QMean score : -0.028
(partial model without unconserved sides chains):
PDB file :
Tito_2L1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L1Q-query.scw
PDB file :
Tito_Scwrl_2L1Q.pdb
: