Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQKGTQFD
1FA8 Chain:A ((1-126))
MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEGN---
General information:
TITO was launched using:
RESULT:
Template:
1FA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64932 for 867 contacts (-74.9/contact) +
2D Compatibility (PS) -13684 + (NN) -5270 + (LL) 0
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -100436.0 ( -115.84 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_1FA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FA8-query.scw
PDB file :
Tito_Scwrl_1FA8.pdb
: