Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADETELKRLYWHSRRGMLELDVLLVPFVQEVYPGLDAEDQARFRKLLECEDQDMFGWFMQRGEPEDADLRRMVRMILDRVQPD
2RGH Chain:A ((460-527))
--DATYIADFYGTNARRIFELAKEMAP-----YPGLSLAESARLRYGLEEE---------MVLAPGDYLIRRTNHLLFERDQLD
General information:
TITO was launched using:
RESULT:
Template:
2RGH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18527 for 433 contacts (42.8/contact) +
2D Compatibility (PS) -7256 + (NN) -2811 + (LL) 1724
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: 6584.0 ( 15.21 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_2RGH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RGH-query.scw
PDB file :
Tito_Scwrl_2RGH.pdb
: