Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIQHRTQDAIRTLTAAFAPFDCLIQATRKGNFSFTIVDQHGVACHSERLYPEQYDDSGKMEEVINRVRKKTLAA
2K49 Chain:A ((61-101))
---------------------------AKNDKPYFNLKAANHQIIGT----SQMYSSTAARDNGIKSVMENGKTT
General information:
TITO was launched using:
RESULT:
Template:
2K49.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4007 for 195 contacts (-20.5/contact) +
2D Compatibility (PS) -4332 + (NN) -1124 + (LL) 3124
1D Compatibility (HY) -400 + (ID) 200
Total energy: -6939.0 ( -35.58 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_2K49.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K49-query.scw
PDB file :
Tito_Scwrl_2K49.pdb
: