Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELILLHNPRCSKSRAALELLEARGLQPQVVRYLETPPSAAELKAILAKLGIPARQLLRTGEDEYKALGLDEPSLGEEAIIEAMARHPKLIERPVLVAGDKAVVGRPPERVLEILA
1S3D Chain:A ((1-114))
--NITIYHNPACGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLAKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQ
General information:
TITO was launched using:
RESULT:
Template:
1S3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82984 for 861 contacts (-96.4/contact) +
2D Compatibility (PS) -12605 + (NN) -10575 + (LL) 180
1D Compatibility (HY) -12800 + (ID) 2250
Total energy: -121034.0 ( -140.57 by residue)
QMean score : 0.776
(partial model without unconserved sides chains):
PDB file :
Tito_1S3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3D-query.scw
PDB file :
Tito_Scwrl_1S3D.pdb
: