Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDLSTWNLTIP----QGRPAITISTSQLQRDYR-SDYFQRT-ADGIRFWVPVNGSHT-RNSEFPRSELRETLSSGRPY---------NWRYARA-----------DNWLEATLRIEAVPSTR------RMIIGQIHSDGSNSGQAAPLVKLLYQL--RLDQGRVQALVRERPDDGGTRAYTLMD------------------GIPLGQPFSYRIGVSRSGLL-------------SVSVNGSALEQQLDPQWAYQGLYFKAGLYLQDNRGPSSEGGRATFSELRVSHQ |
4OZX Chain:A ((8-281)) | --ELSGWSLSVPVDSDNDGKADQIKEKTLAAGYRNSDFFTLSDAGGMVFKAPISGAKTSKNTTYTRSELREMLRKGDTSIATQGVSRNNWVLSSAPLSEQKKAGGVDGTLEATLSVDHVTTTGVNWQVGRVIIGQIHANNDEP------IRLYYRKLPHHQKGSVYFAHEPRKGFGDEQWYEMIGTLQPSHGNQTAAPTEPEAGIALGETFSYRIDATGNKLTVTLMREGRPDVVKTVDMSKSGYSE------AGQYLYFKAGVYNQNKTGKPDDYVQATFYRLKATHG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68037 for 1650 contacts (-41.2/contact) +
2D Compatibility (PS) -22108 + (NN) -7405 + (LL) 696
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -114904.0 ( -69.64 by residue)
QMean score : 0.373
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