Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQKRILVTGAGSGFGREVALRLAA---RGHRTIAGVRGAGQAADLREEAGRRGVP---LRVETLDI----TVAADRERAWEWDIDVLLNNAGSAEAGASAEIPLELVRALFETNVFANLELTQGFVRRMVEQKRG-GKVLFVSSIAGLITGPYTGPYCASKHALEAFAEALHAELKPFGIQVGTINPGPYQTGFNDRMM-----------ETWKRWYDPQRHFTDHSGVRFPFEQYDPEEMIARMVELAEADEGPFRTLLPQAFVEVVKDEQAQAWQRRL |
| 1QYV Chain:A ((5-264)) | -----VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM--KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT-------SPEEVLDRTDIHTFHRFY----QYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92212 for 1846 contacts (-50.0/contact) +
2D Compatibility (PS) -24731 + (NN) -11259 + (LL) 1176
1D Compatibility (HY) -20000 + (ID) 3900
Total energy: -150926.0 ( -81.76 by residue)
QMean score : 0.507
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