Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQPTSPLVLHLPYQSPWEWRQFHQHFALRLLAGVESLGDDHYARSFRANGRPAWFEVRPLAERQVLALSLSPSAHALAAELEARVRRMFDLDSDPAAIARHFAGDPLLGPLVAANPGLRLPVAFDPFEQAVRAIVGQQVTVKAAVTITGRLIQRLGEPLEDLGYDGISHLFPTPAALAQAN---LDGIGMPGKRVQTLQRFAAAIASGELSLDLADGPEALVERLCALPGIGPWTAEYIALRAMGEADAFPAADLGLLKSTVWGPQGIDARSLKARAEAWRPWRAYAAIHLWHHYAAGG
3CVT Chain:A ((4-273))-----------LNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIV------NGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPE---YICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDY-LIKQRF---PGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQP


General information:
TITO was launched using:
RESULT:

Template: 3CVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165029 for 2170 contacts (-76.1/contact) +
2D Compatibility (PS) -28682 + (NN) -15550 + (LL) 652
1D Compatibility (HY) -22800 + (ID) 5250
Total energy: -236659.0 ( -109.06 by residue)
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3CVT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CVT-query.scw
PDB file : Tito_Scwrl_3CVT.pdb: