Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYQRLKGFTDN---LELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGIPT
3JUN Chain:A ((32-182))
-----------ENRAQVAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDG---
General information:
TITO was launched using:
RESULT:
Template:
3JUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31978 for 973 contacts (-32.9/contact) +
2D Compatibility (PS) -16061 + (NN) -7158 + (LL) 1092
1D Compatibility (HY) -13600 + (ID) 4050
Total energy: -71755.0 ( -73.75 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3JUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUN-query.scw
PDB file :
Tito_Scwrl_3JUN.pdb
: