Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDNAIPQGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT
3JUN Chain:A ((37-182))
-------------VAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDG---
General information:
TITO was launched using:
RESULT:
Template:
3JUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28590 for 971 contacts (-29.4/contact) +
2D Compatibility (PS) -15734 + (NN) -6541 + (LL) 804
1D Compatibility (HY) -15200 + (ID) 4550
Total energy: -69811.0 ( -71.90 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_3JUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUN-query.scw
PDB file :
Tito_Scwrl_3JUN.pdb
: