Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTPAELRDAALKHEVAVGEEVLEEFLAADVVVIGAPMYNFTISSQLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQPTGAAHEGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA
4ESE Chain:A ((6-203))
-KVLVLKSSILATSSQSNQLADFFVEQWQAAHAGDQITVRDLAAQPIPVLDGELVGALRPSGTALTPRQQEALALSDELIAELQANDVIVIAAPMYNFNIPTQLKNYFDMIARAGVTFRYTEKGPEGLVTGKRAIILTSRG--------DLVVP-YLRLFLGFIGITDVEFVFAEGIAYGPEVATKAQADAKTLLAQVVA--
General information:
TITO was launched using:
RESULT:
Template:
4ESE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109793 for 1439 contacts (-76.3/contact) +
2D Compatibility (PS) -21408 + (NN) -13943 + (LL) 392
1D Compatibility (HY) -17200 + (ID) 4050
Total energy: -166002.0 ( -115.36 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_4ESE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ESE-query.scw
PDB file :
Tito_Scwrl_4ESE.pdb
: