Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLLIGLIRFYQYAISPLIGPRCRFYPSCSHYTLEAIRVHGALRGGYLGARRLLRCHPWHPGGYDPVPERQEQACACHRTAKPGK
3KW0 Chain:A ((170-187))
--------------------------EYICSEFVNECFKKIGVE------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -968 for 70 contacts (-13.8/contact) +
2D Compatibility (PS) -1912 + (NN) -302 + (LL) 3696
1D Compatibility (HY) 400 + (ID) 200
Total energy: 714.0 ( 10.20 by residue)
QMean score : -0.414
(partial model without unconserved sides chains):
PDB file :
Tito_3KW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KW0-query.scw
PDB file :
Tito_Scwrl_3KW0.pdb
: