Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEINIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEILPLLTSMAQNLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQESGLLVSYGVNLRTLTPGTWQAMTLPEDIKALVG--PGVGLRLDAPNFSDVFNTIKSGLRYTTAVTLLLAYFAAI |
| 3VC5 Chain:A ((171-263)) | ---------------------------------------------------------------------------------------------------------------------KWAGHPGKPEDRFGPALDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAFPGLPLRLD-PNAA---WTVETSIRVGRALDGVLEYLEDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23228 for 562 contacts (-41.3/contact) +
2D Compatibility (PS) -9679 + (NN) -1260 + (LL) 8060
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -32307.0 ( -57.49 by residue)
QMean score : 0.156
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