Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPARHDERSRRA
2CLY Chain:B ((48-61))
----PPAIDWAYYKANVA----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 584 for 43 contacts (13.6/contact) +
2D Compatibility (PS) -1460 + (NN) -463 + (LL) 2968
1D Compatibility (HY) -800 + (ID) 200
Total energy: 629.0 ( 14.63 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_2CLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CLY-query.scw
PDB file :
Tito_Scwrl_2CLY.pdb
: