Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDYATTAAGFDLQRTAAATLSGTLQALNACVECCDRHALPG--RIALFWEGKDGSRASY-TFSELKALSGRFANFLQAQGVRPGDCVAGLLPRTPELLVTILGAWRLGAVYQPLFTAFGPKAIEHRVATAGSKVLVTDAA----------NRDKLDELADPPLA----VTVGGPKGQGI--RRGDFSFWAEL-ERYPAEFEPVPRSGEDPFLMMFTSGTTGLAKPVPVPLKAILAFVGY-LREAVDLRPEDAFWNLADPGWAYGLYYAVAGPLAMGHPTTFYEGPFSVES---TCRIIRDYGITNLAGSPTAYRLLMAAG-AAAETALKGRLRAVSSAGEPLTPEVIRWFADRLGTT---IHDHYGQTELGMVLCNHHALAHPVRVGAAGFACPGHRVVVLDDD-------------LNELPPGQPGILALDRRRSPLMWFPGYQGLETAAFVGDYYLSGDTVELNEDGSISFVGRADDVITTSGYRVGPFDVESALIEHPAVMEAAVIGKPDPERTELVKAFVVLCAGHRPTPELADALQRYVRQRLSAHAYPREIEFLEELPKTPSGKIQRFLLRNQEIARQREAAPRAAAAN |
| 1PG4 Chain:A ((75-627)) | ---------------------------LNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNM---------YFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275643 for 4379 contacts (-62.9/contact) +
2D Compatibility (PS) -54395 + (NN) -22562 + (LL) 4496
1D Compatibility (HY) -24800 + (ID) 8600
Total energy: -381504.0 ( -87.12 by residue)
QMean score : 0.485
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