Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFNQAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCLLRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRVARKQAESEEITSFYLEPVDGQPLLAFQPGQYIGLRLDIDGEEVR--RNYSLSAASNGREYRISVKREAGGR-----VSNYLHDRVAEGDELDLFPPAGDFVLRDSDKPLVLITAGVGITPALAMLQEALPQARP-IRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRAGDSADAEGLLSREKLADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALDA |
| 4EH1 Chain:A ((1-237)) | --------------------------------------------------------------------------------------------------------------------------------------------------------RDGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNGREYRISVKREGVGSDNPGLVSHYLHNNVKVGDSVKLYAPAGDFFYVERERPVVLISAGVGATPMQAILHTLAKQNKSGVTYLYACNSAKEHTFAQETAQLIAQQGWMQQVW-YRDESADDVLQGE-----MQLAELILPIEDGDFYLCGPIGFMQYVVKQLLALGVDKARIHYEVFGP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128923 for 1817 contacts (-71.0/contact) +
2D Compatibility (PS) -24935 + (NN) -14965 + (LL) 13628
1D Compatibility (HY) -20000 + (ID) 5000
Total energy: -180195.0 ( -99.17 by residue)
QMean score : 0.474
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