Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPG---DYPSGKEGDVLTVEFRVMGIPCLGLNGGPAF--RHSEAFSFQVATDDQAETDRLWNAIVDNGGE----------ESACGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFKG
1U6L Chain:A ((2-137))
-SLQIVPYLIFNGNCREAFSCYHQHLGGTLEAM-LPFGDSPE--PADWKDKIMHARLVVGSFALMASDNHPAYPYEGIKGCSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1U6L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23764 for 692 contacts (-34.3/contact) +
2D Compatibility (PS) -12131 + (NN) -4784 + (LL) 3960
1D Compatibility (HY) 2000 + (ID) 300
Total energy: -35019.0 ( -50.61 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_1U6L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6L-query.scw
PDB file :
Tito_Scwrl_1U6L.pdb
: