Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPFRNIGIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAEVLPGHGLQTCSRKIMGEICDLVVVVGGDGSMLGAARALARHKVP-VLGINRGSLGFLTDIRPDELEAKVGEVLDGQYIVESRFLLDAQVRRG-IDSMGQGDALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSRPIVVDGNSELKIVVSPNMQIYP-----QVSCDGQNHFTCAPGDTVTISKKPQKLRLIHPIDHNYYEICRTKLGWGSRLGGGD |
3AFO Chain:A ((101-323)) | ------------------------------------------------HILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGTLGFLSPFDFKEHKKVFQEVISSRAKCLHRTRLECHLKKKDSNSSIVTHAMNDIFLHRGNSPHLTNLDIFIDGEFLTRTTADGVALATPTGSTAYSLSAGGSIVSPLVPAILMTPICPRSLSFRPLILPHSSHIRIKIGSKLNQKPVNSVVKLSVDG------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105770 for 1405 contacts (-75.3/contact) +
2D Compatibility (PS) -21919 + (NN) -10540 + (LL) 5636
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -150493.0 ( -107.11 by residue)
QMean score : 0.421
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