Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWRNPLGQARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLLDPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE |
1NVP Chain:B ((17-50)) | --------------------------------------------------------------------IEDVINDVRDIFLDDGVDEQVLMELKTLWENKLM--------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NVP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4381 for 163 contacts (26.9/contact) +
2D Compatibility (PS) -3575 + (NN) 184 + (LL) 14496
1D Compatibility (HY) -2800 + (ID) 500
Total energy: 12186.0 ( 74.76 by residue)
QMean score : 0.103
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