Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
1T5B Chain:A ((1-182))
MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMR--DAPLTPRQQDALALSDELIAELKAHDVIVIAAPMYNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVFLGFIGITDVNFVFAEGIAYGPE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T5B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109261 for 1350 contacts (-80.9/contact) +
2D Compatibility (PS) -19838 + (NN) -11293 + (LL) 2508
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: -160084.0 ( -118.58 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_1T5B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T5B-query.scw
PDB file :
Tito_Scwrl_1T5B.pdb
: