Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA
3MOM Chain:A ((2-181))
-SISISYSTTYSGWTVADYLADWSAYFGD-----GQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHAT------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MOM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112194 for 1414 contacts (-79.3/contact) +
2D Compatibility (PS) -19230 + (NN) -14596 + (LL) 2444
1D Compatibility (HY) -20800 + (ID) 8750
Total energy: -173126.0 ( -122.44 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_3MOM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MOM-query.scw
PDB file :
Tito_Scwrl_3MOM.pdb
: