Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEAGFGPGRSNMHTGETLAAAPPARPLRQSRLGGLSLFLALAGVAIALAVMALALGERIDLSDENHLLGLFAALLAVFAVSTCGLVLGLAGLLRRSRKRHLALAGIVLNLSCLLWGWHALSTAAAAILMVLGQTGLSFLSALAVLFGMIFFRQA
1H2S Chain:B ((5-20))
-----------------------------------------------------------------------------------------------------------------------------------------IFVGALTVLFGAIAYG--
General information:
TITO was launched using:
RESULT:
Template:
1H2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5585 for 54 contacts (-103.4/contact) +
2D Compatibility (PS) -1723 + (NN) -1523 + (LL) 11352
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -279.0 ( -5.17 by residue)
QMean score : -0.090
(partial model without unconserved sides chains):
PDB file :
Tito_1H2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H2S-query.scw
PDB file :
Tito_Scwrl_1H2S.pdb
: