Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQAHTPSAPLAEVYDVAVVGGGINGVGIAADAAGRGLSVFLCEQHDLAQHTSSASSKLIHGGLRYLEHYEFRLVREALAEREVLLAKAPHIVKPLRFVLP----HRPHLRPAWMIRAGLFLYDHLGKREKLPASRGLRFTGSSPLKAEI--------RRGFE----YSDCAVDDARLVVLNAISAREHGAHVHTRTRCVSARRSKGLWHLHLERSD---GSLYSIRARALVNAAGPWVARFIQDDLKQKSPYGIRLIQGSHIIV--PKLYEGEHAYI-LQNEDRRIVFAIPYLDRFTMIGTTDREYQGDPAKVAISEEETAYLLQVVNAHFKQ-QLAAADILHSFAGVRPL------------CDDESDEPSAITRDYTLSLSAGNGEPP-LLSVFGGKLTTYRKLAESALTQL-----QPFFANLGPAWTAKAPLPGGE-QMQSVEALTEQLANR--YAWLDRELALRWARTYGTRVWRLLDGVNGEADLGEHLGGGLYAREVDYLCKHEWAQDAEDILWRRSKLGLFLSPSQQVRLGQYLQSEHPHRPRVHAA |
2RGO Chain:A ((41-514)) | ------------------------------------GIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGIAPHIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYD------KLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGF-LYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVSPKMRPTKGIHLVVDAKKLPVPQPTYFDTGKQDGRMVFAIPRENK-TYFGTTDTDYQGDFTDPKVTQEDVDYLLDVINHRYPEANITLADIEASWAGLRPLLIGNSGSDYNGG---------TISRGSSLER-----EPDGLLTLSGGKITDYRKMAEGALRLIRQLLKEEYGIETKEIDSKKYQISGGNFDPTKLEETVTELAKEGVAAGLEEEDATYIADFYGTNARRIFE------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167838 for 2761 contacts (-60.8/contact) +
2D Compatibility (PS) -41604 + (NN) -15022 + (LL) 6148
1D Compatibility (HY) -20800 + (ID) 6500
Total energy: -245616.0 ( -88.96 by residue)
QMean score : 0.368
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