Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPVLPEQAQEALDAFGHTASWEQRARLLLQWGERLAPLAEHERQEEHRVHGCESLVWLLGEQRDG---HWRFRADSDARLIRGLLAVLLARVDGIETRELARLDLNDWFTCL--------------GLSR--QLSPSRSNGLNAVLQRMRELAGQTAG
1SU0 Chain:B ((35-141))
-----------------------------------------------LNNPTCGDVISLTVKFDEDKIEDIAFAGNG-CTISTASSSMMTDAVIGKSKEEALALAD-IFSEMVQGQENPAQKELGEAELLAGVAKFPQRIKCSTLAWNALKEAIKR---
General information:
TITO was launched using:
RESULT:
Template:
1SU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50836 for 629 contacts (-80.8/contact) +
2D Compatibility (PS) -9839 + (NN) -6768 + (LL) 3976
1D Compatibility (HY) -800 + (ID) 550
Total energy: -64817.0 ( -103.05 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_1SU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SU0-query.scw
PDB file :
Tito_Scwrl_1SU0.pdb
: