Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQRAYREQGAERVAAAIDARMDEVYWGCYQLQ-QGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRP--VALDASL-LPHAEDLLSLAGFAWARGEGVEAEQALPVYLRDNVATPKKAP
3ZET Chain:A ((3-226))
---ILAIDTATEACSVALWNNGTINAHFELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRKTGATRVLAAIDARMGEVYWAEYQRDAQGVWQGEETEAVLKPERVGERLKQLSGEWATVGTGWSAWPDLA---GLTLHDGEVSLPAAEDMLPIASQKLAAGETVAVEHAEPVYLRNEVAWKK---
General information:
TITO was launched using:
RESULT:
Template:
3ZET.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172255 for 1889 contacts (-91.2/contact) +
2D Compatibility (PS) -22663 + (NN) -3085 + (LL) 380
1D Compatibility (HY) -17600 + (ID) 5550
Total energy: -220773.0 ( -116.87 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_3ZET.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZET-query.scw
PDB file :
Tito_Scwrl_3ZET.pdb
: