Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLNTPRNKPSRTETEAVAASSGRSAVGRRDYTEQLRRAARRNAWDLYGEHFY
2VY1 Chain:A ((113-134))
--------------------------SWRQACYKPLVNIACRHGWDID-----
General information:
TITO was launched using:
RESULT:
Template:
2VY1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -350 for 79 contacts (-4.4/contact) +
2D Compatibility (PS) -2411 + (NN) 316 + (LL) 1328
1D Compatibility (HY) -800 + (ID) 300
Total energy: -2217.0 ( -28.06 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_2VY1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VY1-query.scw
PDB file :
Tito_Scwrl_2VY1.pdb
: