Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
4DUT Chain:A ((6-145))
-ALERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFFKDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNVYSR--
General information:
TITO was launched using:
RESULT:
Template:
4DUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51690 for 1079 contacts (-47.9/contact) +
2D Compatibility (PS) -14768 + (NN) -2500 + (LL) 512
1D Compatibility (HY) -15600 + (ID) 4950
Total energy: -88996.0 ( -82.48 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_4DUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DUT-query.scw
PDB file :
Tito_Scwrl_4DUT.pdb
: