Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAPEREQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEATVQDPEFLLQQMQLREELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEVRQLEERLDD
2DN9 Chain:A ((23-75))
---------------------EIKKAYYQLAKKYHPDTNKDDPK-----AKEKFSQLAEAYEVLSDEVKRKQYDAYGSG----------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4252 for 277 contacts (-15.4/contact) +
2D Compatibility (PS) -6045 + (NN) -5810 + (LL) 11444
1D Compatibility (HY) -400 + (ID) 1000
Total energy: -6063.0 ( -21.89 by residue)
QMean score : 0.723
(partial model without unconserved sides chains):
PDB file :
Tito_2DN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DN9-query.scw
PDB file :
Tito_Scwrl_2DN9.pdb
: