Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEPLILDAPNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNG---GWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDLALDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL
4FHZ Chain:A ((64-266))
----------EATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAP-EPCRANGFGFQWFPIPWLD----GSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRR-AEEIAGIVGFSGRLLAPERLAEEARSK-PPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIAPDGLSVALAFLKERL
General information:
TITO was launched using:
RESULT:
Template:
4FHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136739 for 1688 contacts (-81.0/contact) +
2D Compatibility (PS) -21242 + (NN) -8244 + (LL) 1448
1D Compatibility (HY) -10000 + (ID) 3450
Total energy: -178227.0 ( -105.58 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_4FHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FHZ-query.scw
PDB file :
Tito_Scwrl_4FHZ.pdb
: