Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLSLYLLTVLIWGTTWIAIKLQMGPVAITLSIAYRFALAALVLFAVLLLGRRLQRLDARGQRLCMAQGVCLFCLNFICFYTASQWIPSGLVAVVFSTATLWNALNARLWFGQRIASNVMAGGGLGLLGLGLLFWPELVGHQATPETFYGLGLALLGTLCFSTGNMLSSLQQKAGIRPLTGNAWSMLYGTLILLALCLFQGVPLSFDWSARYVGSLLYLAIPGSVIGFTAYLTLVGRMGPDRAAYCTVLFPVVALNISAFAEGYRWTAPALAGLVLVMLGNVLVFRKPKAPALAGPARST |
2ZXE Chain:G ((25-41)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVAAVLCVIGIIILLAG------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZXE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4739 for 57 contacts (-83.1/contact) +
2D Compatibility (PS) -1683 + (NN) -1825 + (LL) 22220
1D Compatibility (HY) -3600 + (ID) 150
Total energy: 10223.0 ( 179.35 by residue)
QMean score : -0.128
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