Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATWHA---------------MFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK
1N2S Chain:A ((50-180))
---VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK-ALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1N2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1579 for 648 contacts (-2.4/contact) +
2D Compatibility (PS) -11310 + (NN) 7532 + (LL) 2024
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -8483.0 ( -13.09 by residue)
QMean score : -0.028
(partial model without unconserved sides chains):
PDB file :
Tito_1N2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N2S-query.scw
PDB file :
Tito_Scwrl_1N2S.pdb
: