Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCA-STGFFDDFYRHFLASSPQIRAKFATTDMT-------AQKHLLRAGIMNLVMYARGMSDSKLRALGASHS-RAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
2R80 Chain:A ((5-140))
-NDKSNVKAVFAKIGGQAGDLGGEALERLFITYPQTKTYFPHFDLSHGSAQIKGHGKKVAEALVEAANHIDDI-AGALSKLSDLHAQK--LRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKY
General information:
TITO was launched using:
RESULT:
Template:
2R80.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72163 for 903 contacts (-79.9/contact) +
2D Compatibility (PS) -13423 + (NN) -6810 + (LL) 468
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -99678.0 ( -110.39 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2R80.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R80-query.scw
PDB file :
Tito_Scwrl_2R80.pdb
: