Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNRVRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPLAFKLARVFGLAIEAIFDDREGQLD
2LYL Chain:A ((4-61))
--NNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIF--------
General information:
TITO was launched using:
RESULT:
Template:
2LYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36119 for 412 contacts (-87.7/contact) +
2D Compatibility (PS) -6246 + (NN) -2261 + (LL) 408
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -52418.0 ( -127.23 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_2LYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYL-query.scw
PDB file :
Tito_Scwrl_2LYL.pdb
: