Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
2ZXE Chain:G ((15-40))
-DYYRLRVVGLIVAAVLCVIGIIILLA-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7393 for 98 contacts (-75.4/contact) +
2D Compatibility (PS) -2783 + (NN) -3281 + (LL) 2472
1D Compatibility (HY) -3600 + (ID) 150
Total energy: -14735.0 ( -150.36 by residue)
QMean score : -0.044
(partial model without unconserved sides chains):
PDB file :
Tito_2ZXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZXE-query.scw
PDB file :
Tito_Scwrl_2ZXE.pdb
: