Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDTTNPIGFTDANELREKNRATVEKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNINIFGTDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELEDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT
3JUN Chain:A ((40-182))
----------------RQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDG---
General information:
TITO was launched using:
RESULT:
Template:
3JUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27411 for 952 contacts (-28.8/contact) +
2D Compatibility (PS) -15412 + (NN) -6599 + (LL) 476
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -69146.0 ( -72.63 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3JUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUN-query.scw
PDB file :
Tito_Scwrl_3JUN.pdb
: