Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFGSFSWRSPMTGTKPTTPVARYFHQEAQRRGYVLDAAQGNAILHLDRLAERLRRGPSLFRQAPRSLYLWGPVGRGKSWLMDGFFRSADLQGLRRTHFHAFFRRLHDGMFRRQGRPDALGGALDELLGDCRLLCFDEFHVHDIG--DAMLITR-LFRELFGRKITLVCTSNYAPRQLLPNPL---YHERFLPAIRLIETRMEVLEVAGARDYRTISPRQEIASGYASGGYCWPASCACLDELGLSAPEPSQRVTLQSGARTLQARAVCGDLVWFAFADLCEAPTAVMDYLALGERFSTWVLEGVPPMARCSVAAQQRFINLVDVLYDNDRRFFLSAEKALPDLVEGSDLPADMQRTASRLAQLRQLRC |
2W58 Chain:A ((32-202)) | -------------------------------------DGRIKAIRFAERFVAEYEP-----GKKMKGLYLHGSFGVGKTYLLAAIANELAK-RNVSSLI----VYVPELFRELKHS-QTMNEKLDY-IKKVPVLMLDDLGAE---SWVRDDVFGPILQYRMFENLPTFFTSNFDMQQLAHHLTYSQ-KVKAARIMERIRYLAYPIEI-TGPNRR----------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W58.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97215 for 1113 contacts (-87.3/contact) +
2D Compatibility (PS) -16169 + (NN) -4283 + (LL) 13772
1D Compatibility (HY) -6400 + (ID) 1150
Total energy: -111445.0 ( -100.13 by residue)
QMean score : 0.381
|
|
|