Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRLPFLLRCALFCGAGLLAATAQARMESLDDDQLSDVVGQAFINLTTDAANGLNFTRINFGADIETQLNMKKLQLGQYNRSGELAGSADIAIDNFALGTVNDTTGAINPFLISNPYIEFAYDG--S---KMVGIRIGFGEAKGYLSGDIKTLTGNVPVDLYGTGSQLGGSISCGLLALDCLAAKTAITLTGSSQYTAQAELVNSSGNPDPIRAAMIGLKNGTALDMHDSTIIGSLVNVLLPFLTSNDCKLMGAQTCFNLAQYQSFPIGTVDPNNAQNFIDSSKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSRNADGTAPIKVDFGQAFNGIPRQDTCLGGLNKGC |
| 2JQ3 Chain:A ((13-60)) | -------------------------------------------------------------------------------------------------------------------QGYMKHATKTAKDALSSVQESQV-AQQARGWVTDGFSSLKDYWS-TVKDK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1720 for 165 contacts (-10.4/contact) +
2D Compatibility (PS) -4220 + (NN) 3401 + (LL) 16456
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 12067.0 ( 73.13 by residue)
QMean score : -0.188
|
|
|