Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLRVANQQLAQYATVPARLERIEFNPFSLELTLWGLRLGEEKNPQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFGEKGQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPVDFSFDPLGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPYVRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDVAATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLDWQKLFADFTPPPRKAPAPKPAENTDPAAAPTDAAKTTSEPATDGAAKAAAIASGEASKDRPAEKDASVAETERATDDKESAKAAEGAADKVAKQETSKAPKTGKATGQETAKTAEIDKAASDSPQQLADTAKTPPPESTKASAETPAKPWNIVLRDAQLRGYKAHLVDRQPATEVPLEVGPLDLDLQNVDSLGKTPFDLKLKTGLGNRGQVQASGQVVLDPVSARLKVSTRDIDLRVAQAYISPFIRLELRSGFLGSELAVDLKSVEPLAFSVDGSAEVSQLHTLDTIKDRDFVKWTKLTLNGLAYRHEDSLSIQSVSFEEPYARFIINEDRSTNVSELIIPQPASSSGKTAAESKNAPASKPLGIHIGGVRINNGSANFADLTLMPPFGTAIQQLSGEVGTLDTRNSQPAKVDIKGKVDKYAPVTIAGELDPFDPLKKLDITTSFKRVELTTLTPYSGKFAGYRIRKGRLNLDLHYQIERSQLKAENKVLLEGLQLGEKVDSPDAVDLPVKLAVALLKDTKGNIDIQLPVAGDLNNPEFSVMPIVWQTLRNLVLRAVQAPFKFIAGLAAGGNEDLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEGVASAAADGPSIGAKRLELEYQNTYYRMLQRRGDKVPSDAKQLEVPENMQAPLLEGIYRTRLKQQPPAEWKELDSDERTAKMREAVIASWAKSQVLLRQIGQARATRIKDYLVEKGQLPDDRIYLIDVSFAEGEDKGNVDTQLHLDSE |
1Y1S Chain:A ((9-135)) | -----------------------------LGLTKNDLQGAQLAIVPGDPERVE-----------KIAALMDKPVKLASHREFTSWRAE-LDGKAVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPMEFPAVADFA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7692 for 855 contacts (-9.0/contact) +
2D Compatibility (PS) -12307 + (NN) 238 + (LL) 58348
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: 30587.0 ( 35.77 by residue)
QMean score : 0.009
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