Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPQYPTRLPCGSRVLDLARPHVMGILNVTPDSFSDGGRYDRLDDALRHAERMVLEGATLIDVGGESTRPGARSVSPTEELERVAPVVERIARELDVVISVDTSTPAVMRETARLGAGLINDVRSLQRDGALDAAVDSGLAVCLMHMRGEPQTMQ-DAPAYQDVVAEVGAFLQERVDACVAAGIDRERLLLDPGFGFAKT-LEHNLVLFRHLQAL-----HGLGLPLLVGVSRKSMIGKVL-GREVDERLYGSLALAALALAKGARIIRVHDVAATVDVMRMISAVEMAD |
| 2Y5J Chain:A ((8-290)) | ------PAPLQCGRFELTFERPLVMGILN-------------ARDDALRRAERMIAEGADLLDIG--------PPVPLDEELARVIPLVEAL-RPLNVPLSIDTYKPAVMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVRAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207124 for 2115 contacts (-97.9/contact) +
2D Compatibility (PS) -27485 + (NN) -15010 + (LL) -72
1D Compatibility (HY) -22400 + (ID) 6400
Total energy: -278491.0 ( -131.67 by residue)
QMean score : 0.583
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