Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTL----DVRDRAAMSAAVDNLPEEFATLRGLINNAGLA-LGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF------SLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQSWAGFAIHRES
3P19 Chain:A ((15-251))
MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN---------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQ--EANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG-TIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDM----GGVLAADDVARAVLFAYQQPQNVCIREIALAPTKQ-----------
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120476 for 1860 contacts (-64.8/contact) +
2D Compatibility (PS) -23988 + (NN) -6570 + (LL) 1720
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -168964.0 ( -90.84 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: