Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHDD-ADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAE-QGEAFLAAGLDIPLNVWL--KLDSGMHRLGF-DPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLGLLD--LDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLS-AAELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWG----AGLSVDEVARACGTLGYELLSKVTARVPRRYSH |
| 3OO2 Chain:A ((10-371)) | -RSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVL-GVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPG-DMTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYG--YTATDPTTIALLPIGYADGYLRIM-QGSFVNVNGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244548 for 2909 contacts (-84.1/contact) +
2D Compatibility (PS) -37306 + (NN) -10507 + (LL) 464
1D Compatibility (HY) -25600 + (ID) 6100
Total energy: -323597.0 ( -111.24 by residue)
QMean score : 0.459
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